Prerequisites:
- Creat sgeadmin user
- Extract Sun Grid Engine software (binary code) into a network installation directory (i.e. /opt/sge62, with NFS mount)
- Enable tcp/ip services
sge_qmaster 6444/tcp
sge_execd 6445/tcp
sge_execd 6445/tcp
- Set $SGE_ROOT (i.e. export SGE_ROOT=/opt/sge62)
- chown -R sgeadmin $SGE_ROOT
Install master hoast (logon as root on linux64-server):
cd $SGE_ROOT
$SGE_ROOT/install_qmaster
GRID ENGINE BINARY CODE LICENSE
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===============================================================================
GRID ENGINE BINARY CODE
SUPPLEMENTAL LICENSE TERMS
These supplemental license terms ("Supplemental Terms") add to or modify the
terms of the Binary Code License Agreement (collectively, the "Agreement")
for Grid Engine ("Grid Engine"). Capitalized terms not defined in these
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Agreement. These Supplemental Terms shall supersede any inconsistent or
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conditions of this Agreement, Sun grants you a non-exclusive,
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2. License to Distribute Software. In addition to the license granted in
Section 1 (Internal Use License Grant) of these Supplemental Terms, subject
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the Grid Engine Software in binary code form only, provided that you (i)
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likely to become, the subject of a claim of infringement of a patent, trade
secret, copyright or other intellectual property right.
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to you any updates or error corrections (collectively referred to as
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Updates will be considered part of the Software and subject to the terms of
this Agreement.
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this software is available under the terms of the Sun Industry Standards
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Do you agree with that license? (y/n) [n] >> y
Welcome to the Grid Engine installation
---------------------------------------
Grid Engine qmaster host installation
-------------------------------------
Before you continue with the installation please read these hints:
- Your terminal window should have a size of at least
80x24 characters
- The INTR character is often bound to the key Ctrl-C.
The term >Ctrl-C< is used during the installation if you
have the possibility to abort the installation
The qmaster installation procedure will take approximately 5-10 minutes.
Hit <RETURN> to continue >>
Grid Engine admin user account
------------------------------
The current directory
/opt/sge62
is owned by user
sgeadmin
If user >root< does not have write permissions in this directory on *all*
of the machines where Grid Engine will be installed (NFS partitions not
exported for user >root< with read/write permissions) it is recommended to
install Grid Engine that all spool files will be created under the user id
of user >sgeadmin<.
IMPORTANT NOTE: The daemons still have to be started by user >root<.
Do you want to install Grid Engine as admin user >sgeadmin< (y/n) [y] >> y
Installing Grid Engine as admin user >sgeadmin<
Hit <RETURN> to continue >>
Checking $SGE_ROOT directory
----------------------------
The Grid Engine root directory is:
$SGE_ROOT = /opt/sge62
If this directory is not correct (e.g. it may contain an automounter
prefix) enter the correct path to this directory or hit
Your $SGE_ROOT directory: /opt/sge62
Hit <RETURN> to continue >>
Grid Engine TCP/IP communication service
----------------------------------------
The communication settings for sge_qmaster are currently not done.
Now you have the possibility to set/change the communication ports by using the
>shell environment< or you may configure it via a network service, configured
in local >/etc/service<, >NIS< or >NIS+<, adding an entry in the form
sge_qmaster /tcp
to your services database and make sure to use an unused port number.
How do you want to configure the Grid Engine communication ports?
Using the >shell environment<: [1]
Using a network service like >/etc/service<, >NIS/NIS+<: [2]
(default: 2) >> 2
Grid Engine TCP/IP service >sge_qmaster<
----------------------------------------
Using the service
sge_qmaster
for communication with Grid Engine.
Hit <RETURN> to continue >>
Grid Engine TCP/IP communication service
----------------------------------------
The port for sge_execd is currently set as service.
sge_execd service set to port 6445
Now you have the possibility to set/change the communication ports by using the
>shell environment< or you may configure it via a network service, configured
in local >/etc/service<, >NIS< or >NIS+<, adding an entry in the form
sge_execd /tcp
to your services database and make sure to use an unused port number.
How do you want to configure the Grid Engine communication ports?
Using the >shell environment<: [1]
Using a network service like >/etc/service<, >NIS/NIS+<: [2]
(default: 2) >> 2
Grid Engine TCP/IP communication service
-----------------------------------------
Using the service
sge_execd
for communication with Grid Engine.
Hit <RETURN> to continue >>
Grid Engine cells
-----------------
Grid Engine supports multiple cells.
If you are not planning to run multiple Grid Engine clusters or if you don't
know yet what is a Grid Engine cell it is safe to keep the default cell name
default
If you want to install multiple cells you can enter a cell name now.
The environment variable
$SGE_CELL=
will be set for all further Grid Engine commands.
Enter cell name [default] >>
The "common" directory in cell >default< already exists!
Do you want to select another cell name? (y/n) [y] >> n
You can overwrite or delete this directory. If you choose overwrite
(YES option) only the "bootstrap" and "cluster_name" files will be deleted).
Delete (NO option) - will delete the whole directory!
Do you want to overwrite [y] or delete [n] the directory? (y/n) [y] >> y
Deleting bootstrap and cluster_name files!
Using cell >default<.
Hit <RETURN> to continue >>
Unique cluster name
-------------------
The cluster name uniquely identifies a specific Sun Grid Engine cluster.
The cluster name must be unique throughout your organization. The name
is not related to the SGE cell.
The cluster name must start with a letter ([A-Za-z]), followed by letters,
digits ([0-9]), dashes (-) or underscores (_).
Enter new cluster name or hit <RETURN> to use default [cl0001] >> my_test
Your $SGE_CLUSTER_NAME: my_test
Hit <RETURN> to continue >>
Grid Engine qmaster spool directory
-----------------------------------
The qmaster spool directory is the place where the qmaster daemon stores
the configuration and the state of the queuing system.
The admin user >sgeadmin< must have read/write access
to the qmaster spool directory.
If you will install shadow master hosts or if you want to be able to start
the qmaster daemon on other hosts (see the corresponding section in the
Grid Engine Installation and Administration Manual for details) the account
on the shadow master hosts also needs read/write access to this directory.
Enter a qmaster spool directory [/opt/SGE/default/spool/qmaster] >>
Specified qmaster spool directory is not empty!
Do you want to select another qmaster spool directory (y/n) [y] >> n
Using qmaster spool directory >/opt/SGE/default/spool/qmaster<.
Hit <RETURN> to continue >>
Windows Execution Host Support
------------------------------
Are you going to install Windows Execution Hosts? (y/n) [n] >> n
Verifying and setting file permissions
--------------------------------------
Did you install this version with >pkgadd< or did you already verify
and set the file permissions of your distribution (enter: y) (y/n) [y] >> y
We do not verify file permissions. Hit <RETURN> to continue >>
Select default Grid Engine hostname resolving method
----------------------------------------------------
Are all hosts of your cluster in one DNS domain? If this is
the case the hostnames
>hostA< and >hostA.foo.com<
would be treated as equal, because the DNS domain name >foo.com<
is ignored when comparing hostnames.
Are all hosts of your cluster in a single DNS domain (y/n) [y] >> y
Ignoring domain name when comparing hostnames.
Hit <RETURN> to continue >>
Grid Engine JMX MBean server
----------------------------
In order to use the SGE Inspect or the Service Domain Manager (SDM)
SGE adapter you need to configure a JMX server in qmaster. Qmaster
will then load a Java Virtual Machine through a shared library.
NOTE: Java 1.5 or later is required for the JMX MBean server.
Do you want to enable the JMX MBean server (y/n) [y] >> n
Making directories
------------------
Hit <RETURN> to continue >>
Setup spooling
--------------
Your SGE binaries are compiled to link the spooling libraries
during runtime (dynamically). So you can choose between Berkeley DB
spooling and Classic spooling method.
Please choose a spooling method (berkeleydb|classic) [berkeleydb] >>
The Berkeley DB spooling method provides two configurations!
Local spooling:
The Berkeley DB spools into a local directory on this host (qmaster host)
This setup is faster, but you can't setup a shadow master host
Berkeley DB Spooling Server:
If you want to setup a shadow master host, you need to use
Berkeley DB Spooling Server!
In this case you have to choose a host with a configured RPC service.
The qmaster host connects via RPC to the Berkeley DB. This setup is more
failsafe, but results in a clear potential security hole. RPC communication
(as used by Berkeley DB) can be easily compromised. Please only use this
alternative if your site is secure or if you are not concerned about
security. Check the installation guide for further advice on how to achieve
failsafety without compromising security.
Do you want to use a Berkeley DB Spooling Server? (y/n) [n] >> n
Hit <RETURN> to continue >>
Berkeley Database spooling parameters
-------------------------------------
Please enter the database directory now, even if you want to spool locally,
it is necessary to enter this database directory.
Default: [/opt/SGE/default/spool/spooldb] >>
Berkeley Database spooling parameters
-------------------------------------
Please enter the database directory now, even if you want to spool locally,
it is necessary to enter this database directory.
Default: [/opt/SGE/default/spool/spooldb] >>
The spooling directory already exists! Do you want to delete it? [n] >> y
creating directory: /opt/SGE/default/spool/spooldb
Dumping bootstrapping information
Initializing spooling database
Hit <RETURN> to continue >>
Grid Engine group id range
--------------------------
When jobs are started under the control of Grid Engine an additional group id
is set on platforms which do not support jobs. This is done to provide maximum
control for Grid Engine jobs.
This additional UNIX group id range must be unused group id's in your system.
Each job will be assigned a unique id during the time it is running.
Therefore you need to provide a range of id's which will be assigned
dynamically for jobs.
The range must be big enough to provide enough numbers for the maximum number
of Grid Engine jobs running at a single moment on a single host. E.g. a range
like >20000-20100< means, that Grid Engine will use the group ids from
20000-20100 and provides a range for 100 Grid Engine jobs at the same time
on a single host.
You can change at any time the group id range in your cluster configuration.
Please enter a range [20000-20100] >>
Using >20000-20100< as gid range. Hit <RETURN> to continue >>
Grid Engine cluster configuration
---------------------------------
Please give the basic configuration parameters of your Grid Engine
installation:
The pathname of the spool directory of the execution hosts. User >sgeadmin<
must have the right to create this directory and to write into it.
Default: [/opt/SGE/default/spool] >>
Grid Engine cluster configuration (continued)
---------------------------------------------
The email address of the administrator to whom problem reports are sent.
It is recommended to configure this parameter. You may use >none<
if you do not wish to receive administrator mail.
Please enter an email address in the form >user@foo.com<.
Default: [none] >>
The following parameters for the cluster configuration were configured:
execd_spool_dir /opt/SGE/default/spool
administrator_mail none
Do you want to change the configuration parameters (y/n) [n] >> n
Creating local configuration
----------------------------
Creating >act_qmaster< file
Adding default complex attributes
Adding default parallel environments (PE)
Adding SGE default usersets
Adding >sge_aliases< path aliases file
Adding >qtask< qtcsh sample default request file
Adding >sge_request< default submit options file
Creating >sgemaster< script
Creating >sgeexecd< script
Creating settings files for >.profile/.cshrc<
Hit <RETURN> to continue >>
qmaster startup script
----------------------
We can install the startup script that will
start qmaster at machine boot (y/n) [y] >> n
Hit <RETURN> to continue >>
Grid Engine qmaster startup
qmaster startup script
----------------------
We can install the startup script that will
start qmaster at machine boot (y/n) [y] >> y
cp /opt/SGE/default/common/sgemaster /etc/init.d/sgemaster.my_test
/usr/lib/lsb/install_initd /etc/init.d/sgemaster.my_test
Hit <RETURN> to continue >>
Grid Engine qmaster startup
---------------------------
Starting qmaster daemon. Please wait ...
starting sge_qmaster
Hit <RETURN> to continue >>
Adding Grid Engine hosts
------------------------
Please now add the list of hosts, where you will later install your execution
daemons. These hosts will be also added as valid submit hosts.
Please enter a blank separated list of your execution hosts. You may
press if the line is getting too long. Once you are finished
simply press without entering a name.
You also may prepare a file with the hostnames of the machines where you plan
to install Grid Engine. This may be convenient if you are installing Grid
Engine on many hosts.
Do you want to use a file which contains the list of hosts (y/n) [n] >> n
Adding admin and submit hosts
-----------------------------
Please enter a blank seperated list of hosts.
Stop by entering . You may repeat this step until you are
entering an empty list. You will see messages from Grid Engine
when the hosts are added.
Host(s):
Finished adding hosts. Hit <RETURN> to continue >>
If you want to use a shadow host, it is recommended to add this host
to the list of administrative hosts.
If you are not sure, it is also possible to add or remove hosts after the
installation with for adding and
for removing this host
Attention: This is not the shadow host installation
procedure.
You still have to install the shadow host separately
Do you want to add your shadow host(s) now? (y/n) [y] >> n
Creating the default queue and hostgroup
-----------------------------------------------------------
root@linux64-server added "@allhosts" to host group list
root@linux64-server added "all.q" to cluster queue list
Hit <RETURN> to continue >>
Scheduler Tuning
----------------
The details on the different options are described in the manual.
Configurations
--------------
1) Normal
Fixed interval scheduling, report limited scheduling information,
actual + assumed load
2) High
Fixed interval scheduling, report limited scheduling information,
actual load
3) Max
Immediate Scheduling, report no scheduling information,
actual load
Enter the number of your preferred configuration and hit <RETURN>!
Default configuration is [1] >>
We're configuring the scheduler with >Normal< settings!
Do you agree? (y/n) [y] >> y
Using Grid Engine
-----------------
You should now enter the command:
source /opt/SGE/default/common/settings.csh
if you are a csh/tcsh user or
# . /opt/SGE/default/common/settings.sh
if you are a sh/ksh user.
This will set or expand the following environment variables:
- $SGE_ROOT (always necessary)
- $SGE_CELL (if you are using a cell other than >default<)
- $SGE_CLUSTER_NAME (always necessary)
- $SGE_QMASTER_PORT (if you haven't added the service >sge_qmaster<)
- $SGE_EXECD_PORT (if you haven't added the service >sge_execd<)
- $PATH/$path (to find the Grid Engine binaries)
- $MANPATH (to access the manual pages)
Hit <RETURN> to see where Grid Engine logs messages >>
Grid Engine messages
--------------------
Grid Engine messages can be found at:
/tmp/qmaster_messages (during qmaster startup)
/tmp/execd_messages (during execution daemon startup)
After startup the daemons log their messages in their spool directories.
Qmaster: /opt/SGE/default/spool/qmaster/messages
Exec daemon: //messages
Grid Engine startup scripts
---------------------------
Grid Engine startup scripts can be found at:
/opt/SGE/default/common/sgemaster (qmaster)
/opt/SGE/default/common/sgeexecd (execd)
Do you want to see previous screen about using Grid Engine again (y/n) [n] >> n
Your Grid Engine qmaster installation is now completed
------------------------------------------------------
Please now login to all hosts where you want to run an execution daemon
and start the execution host installation procedure.
If you want to run an execution daemon on this host, please do not forget
to make the execution host installation in this host as well.
All execution hosts must be administrative hosts during the installation.
All hosts which you added to the list of administrative hosts during this
installation procedure can now be installed.
You may verify your administrative hosts with the command
# qconf -sh
and you may add new administrative hosts with the command
# qconf -ah
Please hit <RETURN> >>
sge_qmaster successfully installed!
[root@linux64-server ~]# ln -s /opt/SGE/default/common/settings.sh /etc/profile.d/sge.sh
[root@linux64-server ~]# ln -s /opt/SGE/default/common/settings.csh /etc/profile.d/sge.csh
[root@linux64-server ~]# qconf -ah linux64-client1
[root@linux64-server ~]# qconf -as linux64-client1
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